<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE data SYSTEM "../../../lib/pkp/dtd/xmlData.dtd">

<!--
  * 3.1.0_update_a.xml
  *
  * Copyright (c) 2014-2017 Simon Fraser University
  * Copyright (c) 2003-2017 John Willinsky
  * Distributed under the GNU GPL v2. For full terms see the file docs/COPYING.
  *
  * 3.1.0.0 general updates only for installations using 3.x.
  -->
<data>
	<sql>
		<!-- issue #2506: repair migrated files genre ids -->
		<query driver="mysql">UPDATE submission_files sf, genres g, submissions s SET sf.genre_id = g.genre_id WHERE sf.genre_id = 1 AND g.entry_key = 'SUBMISSION' AND g.context_id = s.context_id AND s.submission_id = sf.submission_id</query>
		<query driver="mysqli">UPDATE submission_files sf, genres g, submissions s SET sf.genre_id = g.genre_id WHERE sf.genre_id = 1 AND g.entry_key = 'SUBMISSION' AND g.context_id = s.context_id AND s.submission_id = sf.submission_id</query>
		<query driver="postgres7">UPDATE submission_files SET genre_id = g.genre_id FROM genres g, submissions s WHERE submission_files.genre_id = 1 AND g.entry_key = 'SUBMISSION' AND g.context_id = s.context_id AND s.submission_id = submission_files.submission_id</query>
	</sql>
	<sql><!-- pkp/pkp-lib#2543 -->
		<query>UPDATE filter_groups SET input_type = 'class::classes.article.Article' WHERE symbolic = 'article=>doaj-json'</query>
	</sql>
	<sql><!-- pkp/pkp-lib#2896 -->
		<query>UPDATE journal_settings SET setting_name = 'citationsEnabledSubmission' WHERE setting_name = 'referencesEnabledSubmission'</query>
		<query>UPDATE journal_settings SET setting_name = 'citationsEnabledWorkflow' WHERE setting_name = 'referencesEnabledWorkflow'</query>
		<query>UPDATE journal_settings SET setting_name = 'citationsRequired' WHERE setting_name = 'referencesRequired'</query>
	</sql>
	<!-- update the supp file ids to the new file ids, ASSOC_TYPE_SUBMISSION_FILE_COUNTER_OTHER = 531 -->
	<sql>
		<query driver="mysql">UPDATE metrics m, submission_file_settings sfs SET m.assoc_id = sfs.file_id WHERE m.assoc_type = 531 AND sfs.setting_name = 'old-supp-id' AND sfs.setting_value = m.assoc_id</query>
		<query driver="mysqli">UPDATE metrics m, submission_file_settings sfs SET m.assoc_id = sfs.file_id WHERE m.assoc_type = 531 AND sfs.setting_name = 'old-supp-id' AND sfs.setting_value = m.assoc_id</query>
		<query driver="postgres7">UPDATE metrics SET assoc_id = sfs.file_id FROM submission_file_settings sfs WHERE metrics.assoc_type = 531 AND sfs.setting_name = 'old-supp-id' AND CAST(nullif(sfs.setting_value, '') AS integer) = metrics.assoc_id</query>
	</sql>
</data>

